Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 1988257 - 1988332 | Not Available |
| hypothetical protein | DI534_09395 | Not Available | Positive | 1988395 - 1989342 | 32136.1 |
| Trna-ile | Not Available | Not Available | Positive | 1989461 - 1989537 | Not Available |
| hypothetical protein | DI534_09405 | Not Available | Negative | 1989605 - 1990012 | 14811.5 |
| dna gyrase subunit a | DI534_09410 | Not Available | Negative | 1990009 - 1992645 | 96757.8 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DI534_09415 | Not Available | Negative | 1992766 - 1994757 | 73132.3 |
| duf721 domain-containing protein | DI534_09420 | Not Available | Negative | 1994907 - 1995404 | 18210.4 |
| dna replication/repair protein recf | DI534_09425 | Not Available | Negative | 1995401 - 1996573 | 42275.3 |
| decarboxylating 6-phosphogluconate dehydrogenase | DI534_09430 | Not Available | Negative | 1996582 - 1997466 | 31448.5 |
| dna polymerase iii subunit beta | DI534_09435 | Not Available | Negative | 1997502 - 1998650 | 40906.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
