Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsw | DI534_09335 | Not Available | Positive | 1975681 - 1977066 | 48986.3 |
| cell division protein ftsi | DI534_09340 | Not Available | Positive | 1977063 - 1978520 | 50778.3 |
| serine/threonine protein kinase | DI534_09345 | Not Available | Positive | 1978517 - 1980181 | 56948.6 |
| stk1 family pasta domain-containing ser/thr kinase | DI534_09350 | Not Available | Positive | 1980239 - 1981960 | 60215.5 |
| anthranilate synthase component ii | DI534_09355 | Not Available | Negative | 1981968 - 1982606 | 22421.7 |
| class e sortase | DI534_09360 | Not Available | Negative | 1982761 - 1983636 | 31230.5 |
| septation inhibitor protein | DI534_09365 | Not Available | Positive | 1983709 - 1983951 | 9032.24 |
| hypothetical protein | DI534_09370 | Not Available | Negative | 1984003 - 1984947 | 33784.4 |
| peptidylprolyl isomerase | DI534_09375 | Not Available | Negative | 1984944 - 1985483 | 18995.6 |
| amidase | DI534_09385 | Not Available | Positive | 1986256 - 1988229 | 70369.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
