Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_09285 | Not Available | Negative | 1967378 - 1968226 | 26258.0 |
| padr family transcriptional regulator | DI534_09290 | Not Available | Positive | 1968445 - 1969068 | 22033.8 |
| alpha/beta hydrolase | DI534_09295 | Not Available | Positive | 1969226 - 1969990 | 27023.9 |
| hypothetical protein | DI534_09300 | Not Available | Negative | 1970017 - 1970496 | 17999.4 |
| 30s ribosomal protein s6--l-glutamate ligase | DI534_09305 | Not Available | Positive | 1970523 - 1971713 | 43348.4 |
| hypothetical protein | DI534_09310 | Not Available | Negative | 1971735 - 1972532 | 27532.9 |
| Trna-leu | Not Available | Not Available | Positive | 1972752 - 1972837 | Not Available |
| duf2662 domain-containing protein | DI534_09320 | Not Available | Positive | 1973170 - 1973871 | 25350.3 |
| fha domain-containing protein | DI534_09325 | Not Available | Positive | 1973868 - 1974425 | 19917.1 |
| serine/threonine-protein phosphatase | DI534_09330 | Not Available | Positive | 1974429 - 1975679 | 44447.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
