Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enterochelin abc transporter permease | DI534_09235 | Not Available | Positive | 1958222 - 1959268 | 38059.8 |
| iron abc transporter atp-binding protein | DI534_09240 | Not Available | Positive | 1959265 - 1960026 | 27794.5 |
| siderophore-interacting protein | DI534_09245 | Not Available | Positive | 1960039 - 1960812 | 27830.2 |
| endonuclease nucs | DI534_09250 | Not Available | Positive | 1960871 - 1961566 | 25364.6 |
| haloacid dehalogenase | DI534_09255 | Not Available | Positive | 1961598 - 1962254 | 23255.5 |
| sulfurtransferase | DI534_09260 | Not Available | Negative | 1962280 - 1962753 | 16593.7 |
| hypothetical protein | DI534_09265 | Not Available | Negative | 1962846 - 1963553 | 24808.6 |
| bile acid:sodium symporter | DI534_09270 | Not Available | Positive | 1963643 - 1964521 | 30919.4 |
| 5,10-methylene tetrahydromethanopterin reductase | DI534_09275 | Not Available | Negative | 1964770 - 1966158 | 50802.3 |
| hypothetical protein | DI534_09280 | Not Available | Negative | 1966349 - 1967278 | 28003.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
