Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase | DI534_09185 | Not Available | Negative | 1946611 - 1947519 | 32240.6 |
| peptidase m13 | DI534_09190 | Not Available | Negative | 1947513 - 1949492 | 73043.7 |
| nad-dependent dehydratase | DI534_09195 | Not Available | Positive | 1949598 - 1950581 | 34883.6 |
| transcriptional regulator | DI534_09200 | Not Available | Negative | 1950655 - 1951713 | 35841.9 |
| mfs transporter | DI534_09205 | Not Available | Positive | 1951803 - 1953050 | 42349.5 |
| mate family efflux transporter | DI534_09210 | Not Available | Positive | 1953129 - 1954406 | 42576.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DI534_09215 | Not Available | Positive | 1954391 - 1955695 | 47408.9 |
| hypothetical protein | DI534_09220 | Not Available | Positive | 1955790 - 1955978 | 6840.21 |
| iron abc transporter substrate-binding protein | DI534_09225 | Not Available | Positive | 1956062 - 1957108 | 36316.1 |
| iron abc transporter permease | DI534_09230 | Not Available | Positive | 1957189 - 1958232 | 37580.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
