Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_09135 | Not Available | Negative | 1937285 - 1937563 | 10712.0 |
| hypothetical protein | DI534_09140 | Not Available | Negative | 1938177 - 1938743 | 21305.6 |
| c-type cytochrome biogenesis protein ccsb | DI534_09145 | Not Available | Negative | 1939266 - 1940118 | 30940.0 |
| hypothetical protein | DI534_09150 | Not Available | Positive | 1940325 - 1940681 | 12146.3 |
| hypothetical protein | DI534_09155 | Not Available | Negative | 1940804 - 1941292 | 16283.3 |
| hypothetical protein | DI534_09160 | Not Available | Negative | 1941289 - 1942272 | 34581.3 |
| rna polymerase subunit sigma-70 | DI534_09165 | Not Available | Negative | 1942256 - 1942762 | 19256.8 |
| hypothetical protein | DI534_09170 | Not Available | Positive | 1942878 - 1943141 | 9318.85 |
| glutamyl-trna reductase | DI534_09175 | Not Available | Positive | 1943126 - 1944367 | 43051.7 |
| hypothetical protein | DI534_09180 | Not Available | Negative | 1944413 - 1946317 | 65921.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
