Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_09085 | Not Available | Positive | 1923629 - 1924870 | 44205.0 |
| hypothetical protein | DI534_09090 | Not Available | Positive | 1924860 - 1926002 | 41257.8 |
| class ii fructose-bisphosphate aldolase | DI534_09095 | Not Available | Negative | 1926058 - 1927089 | 36347.0 |
| glycerol kinase | DI534_09100 | Not Available | Negative | 1927129 - 1928646 | 55224.9 |
| tetr/acrr family transcriptional regulator | DI534_09105 | Not Available | Positive | 1928704 - 1929288 | 22056.6 |
| multidrug abc transporter atp-binding protein | DI534_09110 | Not Available | Positive | 1929323 - 1931056 | 62599.9 |
| multidrug abc transporter atp-binding protein | DI534_09115 | Not Available | Positive | 1931152 - 1933152 | 71829.8 |
| dna recombination protein rmuc | DI534_09120 | Not Available | Negative | 1933183 - 1934697 | 55765.4 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | DI534_09125 | Not Available | Positive | 1934928 - 1936424 | 52666.8 |
| dna polymerase iii subunit epsilon | DI534_09130 | Not Available | Negative | 1936559 - 1937149 | 20575.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
