Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | DI534_00850 | Not Available | Positive | 178569 - 179408 | 29929.0 |
| imidazole glycerol phosphate synthase subunit hisf | DI534_00855 | Not Available | Positive | 179408 - 180169 | 26045.9 |
| phosphoribosyl-amp cyclohydrolase | DI534_00860 | Not Available | Positive | 180166 - 180546 | 13867.2 |
| anthranilate synthase component i | DI534_00865 | Not Available | Positive | 180543 - 182081 | 54423.5 |
| hypothetical protein | DI534_00870 | Not Available | Positive | 182078 - 182677 | 19988.5 |
| hypothetical protein | DI534_00875 | Not Available | Positive | 182747 - 182977 | 8011.94 |
| indole-3-glycerol phosphate synthase trpc | DI534_00880 | Not Available | Positive | 182979 - 183755 | 26745.9 |
| tryptophan synthase subunit beta | DI534_00885 | Not Available | Positive | 183752 - 184981 | 43661.6 |
| tryptophan synthase subunit alpha | DI534_00890 | Not Available | Positive | 184987 - 185763 | 26087.2 |
| prolipoprotein diacylglyceryl transferase | DI534_00895 | Not Available | Positive | 185831 - 186862 | 37852.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
