Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DI534_08985 | Not Available | Negative | 1904373 - 1905512 | 39611.3 |
| ai-2e family transporter | DI534_08990 | Not Available | Positive | 1905692 - 1906882 | 42721.1 |
| threonine ammonia-lyase | DI534_08995 | Not Available | Positive | 1906842 - 1908110 | 44626.9 |
| transcription elongation factor grea | DI534_09000 | Not Available | Negative | 1908123 - 1908608 | 17220.1 |
| hypothetical protein | DI534_09005 | Not Available | Negative | 1908678 - 1909118 | 15426.5 |
| hypothetical protein | DI534_09010 | Not Available | Positive | 1909175 - 1909414 | 8620.49 |
| hemolysin iii | DI534_09015 | Not Available | Negative | 1909487 - 1910197 | 25795.3 |
| isoprenyl transferase | DI534_09020 | Not Available | Positive | 1910284 - 1911069 | 29002.4 |
| aminotransferase | DI534_09025 | Not Available | Positive | 1911084 - 1912211 | 39290.5 |
| ribonuclease | DI534_09030 | Not Available | Positive | 1912482 - 1913837 | 49085.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
