Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DI534_08935 | Not Available | Positive | 1892818 - 1894116 | 45523.6 |
| alanine racemase | DI534_08940 | Not Available | Positive | 1894123 - 1895343 | 43130.7 |
| fad-linked oxidoreductase | DI534_08945 | Not Available | Positive | 1895376 - 1896680 | 47445.6 |
| hypothetical protein | DI534_08950 | Not Available | Positive | 1896812 - 1897384 | 20986.3 |
| protease | DI534_08955 | Not Available | Positive | 1897462 - 1898352 | 31836.0 |
| hypothetical protein | DI534_08960 | Not Available | Negative | 1898546 - 1899760 | 45869.0 |
| hypothetical protein | DI534_08965 | Not Available | Negative | 1899889 - 1901289 | 49842.3 |
| spermidine/putrescine abc transporter atp-binding protein | DI534_08970 | Not Available | Negative | 1901580 - 1902677 | 39216.2 |
| abc transporter permease | DI534_08975 | Not Available | Negative | 1902674 - 1903468 | 28243.4 |
| abc transporter permease | DI534_08980 | Not Available | Negative | 1903465 - 1904358 | 31333.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
