Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacid dehydrogenase | DI534_08835 | Not Available | Positive | 1872701 - 1873732 | 36870.6 |
| hypothetical protein | DI534_08840 | Not Available | Positive | 1873739 - 1874599 | 28302.1 |
| 50s ribosomal protein l25 | DI534_08845 | Not Available | Positive | 1874799 - 1875428 | 21927.0 |
| aminoacyl-trna hydrolase | DI534_08850 | Not Available | Positive | 1875570 - 1876160 | 20956.2 |
| hypothetical protein | DI534_08855 | Not Available | Positive | 1876081 - 1876383 | 10778.9 |
| transcription-repair coupling factor | DI534_08860 | Not Available | Positive | 1876394 - 1879951 | 128621.0 |
| hypothetical protein | DI534_08865 | Not Available | Positive | 1880013 - 1880432 | 14888.8 |
| cpbp family intramembrane metalloprotease domain-containing protein | DI534_08870 | Not Available | Negative | 1880511 - 1881293 | 27983.0 |
| mfs transporter | DI534_08875 | Not Available | Positive | 1881329 - 1882786 | 49727.7 |
| nucleoside triphosphate pyrophosphohydrolase | DI534_08880 | Not Available | Positive | 1882880 - 1883551 | 23802.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
