Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_08685 | Not Available | Positive | 1840285 - 1840986 | 25822.7 |
| trwc relaxase | DI534_08690 | Not Available | Negative | 1841029 - 1844466 | 123193.0 |
| transcriptional regulator | DI534_08695 | Not Available | Positive | 1845032 - 1845322 | 10899.1 |
| bleomycin resistance protein | DI534_08700 | Not Available | Positive | 1845332 - 1845718 | 13564.1 |
| cadmium-translocating p-type atpase | DI534_08710 | Not Available | Positive | 1846211 - 1848130 | 66449.5 |
| hypothetical protein | DI534_08715 | Not Available | Positive | 1848238 - 1848963 | 25212.4 |
| chromate transporter | DI534_08720 | Not Available | Negative | 1848987 - 1850204 | 41448.3 |
| coa-disulfide reductase | DI534_08725 | Not Available | Negative | 1850238 - 1851620 | 48774.8 |
| aquaporin family protein | DI534_08730 | Not Available | Negative | 1851617 - 1852312 | 23409.0 |
| arsr family transcriptional regulator | DI534_08735 | Not Available | Positive | 1852361 - 1853038 | 23984.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
