Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| qace family quaternary ammonium compound efflux smr transporter | DI534_08580 | Not Available | Positive | 1817901 - 1818227 | 11277.3 |
| hypothetical protein | DI534_08585 | Not Available | Positive | 1818605 - 1818979 | 13853.4 |
| dna-binding response regulator | DI534_08590 | Not Available | Negative | 1818976 - 1819674 | 24789.6 |
| hypothetical protein | DI534_08595 | Not Available | Negative | 1819668 - 1821179 | 54175.2 |
| phosphate abc transporter permease subunit pstc | DI534_08600 | Not Available | Positive | 1821245 - 1822393 | 40376.2 |
| phosphate abc transporter permease ptsa | DI534_08605 | Not Available | Positive | 1822482 - 1823795 | 46660.8 |
| phosphate abc transporter substrate-binding protein | DI534_08610 | Not Available | Positive | 1823849 - 1825492 | 57192.4 |
| hypothetical protein | DI534_08615 | Not Available | Positive | 1827393 - 1829519 | 72083.1 |
| hypothetical protein | DI534_08620 | Not Available | Positive | 1829618 - 1830769 | 39809.8 |
| hypothetical protein | DI534_08625 | Not Available | Positive | 1830766 - 1831464 | 23588.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
