Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | DI534_00800 | Not Available | Positive | 168941 - 169846 | 32572.8 |
| dna-directed rna polymerase subunit omega | DI534_00805 | Not Available | Positive | 169858 - 170112 | 9323.04 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DI534_00810 | Not Available | Positive | 170191 - 171369 | 40690.9 |
| methionine adenosyltransferase | DI534_00815 | Not Available | Positive | 171412 - 172608 | 43460.3 |
| hypothetical protein | DI534_00820 | Not Available | Positive | 172678 - 174645 | 69477.7 |
| methionyl-trna formyltransferase | DI534_00825 | Not Available | Positive | 174795 - 175712 | 31701.8 |
| methyltransferase | DI534_00830 | Not Available | Positive | 175709 - 177088 | 48076.8 |
| ribulose-phosphate 3-epimerase | DI534_00835 | Not Available | Positive | 177166 - 177777 | 21604.9 |
| peptidylprolyl isomerase | DI534_00840 | Not Available | Positive | 177787 - 178155 | 12911.3 |
| phosphoribosyl-atp diphosphatase | DI534_00845 | Not Available | Positive | 178259 - 178522 | 9612.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
