Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_08425 | Not Available | Positive | 1788828 - 1789265 | 15299.2 |
| transcriptional regulator | DI534_08430 | Not Available | Negative | 1789269 - 1790282 | 36247.3 |
| sugar abc transporter atp-binding protein | DI534_08435 | Not Available | Negative | 1790293 - 1791819 | 54580.2 |
| sugar abc transporter permease yjff | DI534_08440 | Not Available | Negative | 1791864 - 1792883 | 35494.7 |
| sugar abc transporter permease | DI534_08445 | Not Available | Negative | 1792880 - 1793908 | 35163.5 |
| sugar abc transporter atp-binding protein | DI534_08450 | Not Available | Negative | 1793905 - 1795482 | 56848.2 |
| laci family transcriptional regulator | DI534_08455 | Not Available | Negative | 1795557 - 1796525 | 33655.8 |
| laci family transcriptional regulator | DI534_08460 | Not Available | Positive | 1796887 - 1797912 | 34531.2 |
| atpase | DI534_08465 | Not Available | Positive | 1798114 - 1799691 | 53171.8 |
| l-ribulose-5-phosphate 4-epimerase | DI534_08470 | Not Available | Positive | 1799688 - 1800386 | 24713.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
