Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate dehydrogenase | DI534_08375 | Not Available | Positive | 1780177 - 1781772 | 55563.9 |
| hypothetical protein | DI534_08380 | Not Available | Positive | 1781799 - 1782143 | 11332.3 |
| 3-isopropylmalate dehydrogenase | DI534_08385 | Not Available | Positive | 1782183 - 1783229 | 36459.4 |
| branched chain amino acid aminotransferase | DI534_08390 | Not Available | Positive | 1783278 - 1784390 | 41166.8 |
| vapc toxin family pin domain ribonuclease | DI534_08395 | Not Available | Negative | 1784405 - 1784779 | 12961.5 |
| cell division protein mraz | DI534_08400 | Not Available | Negative | 1784772 - 1785014 | 8853.62 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | DI534_08405 | Not Available | Positive | 1785293 - 1786075 | 28272.7 |
| mfs transporter | DI534_08410 | Not Available | Positive | 1786072 - 1787334 | 41998.4 |
| putative sulfate exporter family transporter | DI534_08415 | Not Available | Positive | 1787346 - 1788389 | 34592.9 |
| hypothetical protein | DI534_08420 | Not Available | Positive | 1788460 - 1788792 | 11506.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
