Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system prevent-host-death family antitoxin | DI534_08325 | Not Available | Negative | 1770170 - 1770421 | 9433.76 |
| merr family transcriptional regulator | DI534_08330 | Not Available | Positive | 1770587 - 1770964 | 14293.2 |
| 4-carboxymuconolactone decarboxylase | DI534_08335 | Not Available | Positive | 1770961 - 1771356 | 14116.0 |
| acetolactate synthase large subunit | DI534_08340 | Not Available | Positive | 1771529 - 1773352 | 64347.1 |
| acetolactate synthase small subunit | DI534_08345 | Not Available | Positive | 1773357 - 1773866 | 18486.7 |
| ketol-acid reductoisomerase | DI534_08350 | Not Available | Positive | 1773948 - 1774973 | 36983.4 |
| hypothetical protein | DI534_08355 | Not Available | Positive | 1775154 - 1777922 | 97849.1 |
| mannitol-1-phosphate 5-dehydrogenase | DI534_08360 | Not Available | Positive | 1777991 - 1779133 | 40629.2 |
| hypothetical protein | DI534_08365 | Not Available | Positive | 1779230 - 1779712 | 17247.7 |
| hypothetical protein | DI534_08370 | Not Available | Positive | 1779709 - 1780059 | 12317.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
