Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_08265 | Not Available | Negative | 1757419 - 1757970 | 17435.1 |
| hypothetical protein | DI534_08270 | Not Available | Negative | 1757970 - 1758158 | 6949.51 |
| mmpl family transporter | DI534_08280 | Not Available | Positive | 1758858 - 1761821 | 102473.0 |
| hypothetical protein | DI534_08285 | Not Available | Positive | 1761818 - 1763626 | 59573.9 |
| hypothetical protein | DI534_08290 | Not Available | Negative | 1763950 - 1764831 | 32436.8 |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | DI534_08295 | Not Available | Positive | 1764933 - 1766417 | 55251.7 |
| trehalose-phosphatase | DI534_08300 | Not Available | Positive | 1766387 - 1767205 | 29268.8 |
| dihydroxy-acid dehydratase | DI534_08305 | Not Available | Positive | 1767319 - 1769022 | 59371.3 |
| vapc toxin family pin domain ribonuclease | DI534_08315 | Not Available | Positive | 1769379 - 1769777 | 14617.5 |
| pin domain nuclease | DI534_08320 | Not Available | Negative | 1769815 - 1770198 | 13733.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
