Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_08060 | Not Available | Negative | 1712468 - 1713241 | 27390.8 |
| hypothetical protein | DI534_08065 | Not Available | Positive | 1713316 - 1714311 | 36513.0 |
| hypothetical protein | DI534_08070 | Not Available | Positive | 1714419 - 1714934 | 16698.3 |
| dna-binding response regulator | DI534_08075 | Not Available | Negative | 1715010 - 1715690 | 24790.6 |
| sensor histidine kinase | DI534_08080 | Not Available | Negative | 1715668 - 1717131 | 52308.2 |
| aquaporin | DI534_08085 | Not Available | Negative | 1717212 - 1717892 | 22821.4 |
| duf58 domain-containing protein | DI534_08090 | Not Available | Negative | 1717992 - 1719305 | 46866.1 |
| aaa family atpase | DI534_08095 | Not Available | Negative | 1719312 - 1720271 | 34161.3 |
| duf4350 domain-containing protein | DI534_08100 | Not Available | Negative | 1720333 - 1721544 | 42184.1 |
| duf4129 domain-containing protein | DI534_08105 | Not Available | Negative | 1721541 - 1722260 | 26418.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
