Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | DI534_00750 | Not Available | Positive | 157408 - 158277 | 30851.7 |
| aliphatic sulfonates abc transporter substrate-binding protein | DI534_00755 | Not Available | Positive | 158328 - 159353 | 35071.2 |
| nitrate abc transporter permease | DI534_00760 | Not Available | Positive | 159373 - 160257 | 31239.6 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | DI534_00765 | Not Available | Positive | 160330 - 160866 | 19233.2 |
| aspartate carbamoyltransferase | DI534_00770 | Not Available | Positive | 160863 - 161822 | 33938.7 |
| dihydroorotase | DI534_00775 | Not Available | Positive | 161819 - 163153 | 46094.0 |
| hypothetical protein | DI534_00780 | Not Available | Positive | 163146 - 163688 | 19221.2 |
| carbamoyl phosphate synthase small subunit | DI534_00785 | Not Available | Positive | 163685 - 164827 | 40312.7 |
| carbamoyl phosphate synthase large subunit | DI534_00790 | Not Available | Positive | 164827 - 168123 | 117074.0 |
| orotidine-5'-phosphate decarboxylase | DI534_00795 | Not Available | Positive | 168120 - 168938 | 27265.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
