Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-6-phosphate isomerase, class i | DI534_08010 | Not Available | Positive | 1700368 - 1701498 | 39552.2 |
| arac family transcriptional regulator | DI534_08015 | Not Available | Negative | 1701521 - 1702474 | 34422.4 |
| udp-glucose 4-epimerase gale | DI534_08020 | Not Available | Positive | 1702545 - 1703513 | 34570.0 |
| sporulation protein | DI534_08025 | Not Available | Positive | 1703660 - 1703986 | 12271.4 |
| glycosyltransferase family 2 protein | DI534_08030 | Not Available | Positive | 1704185 - 1707013 | 98067.7 |
| hypothetical protein | DI534_08035 | Not Available | Positive | 1707006 - 1708628 | 52361.1 |
| hypothetical protein | DI534_08040 | Not Available | Negative | 1708681 - 1709115 | 16609.9 |
| duf3499 domain-containing protein | DI534_08045 | Not Available | Positive | 1709185 - 1709400 | 7810.35 |
| phosphomannomutase/phosphoglucomutase | DI534_08050 | Not Available | Positive | 1709431 - 1710816 | 48572.1 |
| adenosylhomocysteinase | DI534_08055 | Not Available | Positive | 1710936 - 1712423 | 53421.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
