Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_07960 | Not Available | Positive | 1689028 - 1689765 | 25505.6 |
| acyl-coa dehydrogenase | DI534_07965 | Not Available | Negative | 1689850 - 1691028 | 42982.0 |
| hypothetical protein | DI534_07970 | Not Available | Positive | 1691152 - 1692366 | 45181.0 |
| abc transporter permease | DI534_07975 | Not Available | Positive | 1692363 - 1693196 | 30477.1 |
| abc transporter atp-binding protein | DI534_07980 | Not Available | Positive | 1693199 - 1693939 | 27022.7 |
| aminotransferase degt | DI534_07985 | Not Available | Positive | 1693939 - 1695108 | 43113.1 |
| n-acetyltransferase | DI534_07990 | Not Available | Positive | 1695105 - 1695602 | 18634.3 |
| hypothetical protein | DI534_07995 | Not Available | Positive | 1695599 - 1698157 | 92539.7 |
| hypothetical protein | DI534_08000 | Not Available | Positive | 1698154 - 1699320 | 43038.0 |
| hypothetical protein | DI534_08005 | Not Available | Positive | 1699317 - 1700357 | 38579.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
