Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | DI534_07910 | Not Available | Negative | 1678157 - 1679137 | 35123.9 |
| aminotransferase degt | DI534_07915 | Not Available | Negative | 1679137 - 1680234 | 38631.9 |
| n-acetyltransferase | DI534_07920 | Not Available | Negative | 1680231 - 1680869 | 22001.9 |
| exopolysaccharide biosynthesis protein | DI534_07925 | Not Available | Negative | 1680915 - 1682234 | 46890.2 |
| exopolysaccharide production protein | DI534_07930 | Not Available | Negative | 1682231 - 1683529 | 47048.5 |
| sam-dependent methyltransferase | DI534_07935 | Not Available | Positive | 1683659 - 1684459 | 29018.0 |
| glycosyl transferase | DI534_07940 | Not Available | Positive | 1684516 - 1685823 | 45499.2 |
| hypothetical protein | DI534_07945 | Not Available | Negative | 1685828 - 1686211 | 12707.0 |
| dna-binding response regulator | DI534_07950 | Not Available | Negative | 1686323 - 1686964 | 23020.7 |
| two-component sensor histidine kinase | DI534_07955 | Not Available | Negative | 1686952 - 1688853 | 65581.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
