Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl sugar amidotransferase | DI534_07860 | Not Available | Positive | 1666156 - 1667265 | 41844.7 |
| imidazole glycerol phosphate synthase subunit hish | DI534_07865 | Not Available | Positive | 1667262 - 1667867 | 21854.2 |
| imidazole glycerol phosphate synthase subunit hisf | DI534_07870 | Not Available | Positive | 1667864 - 1668634 | 26434.7 |
| glycosyltransferase | DI534_07875 | Not Available | Positive | 1668526 - 1669809 | 46938.3 |
| abc transporter atp-binding protein | DI534_07880 | Not Available | Positive | 1669820 - 1671595 | 63728.4 |
| hypothetical protein | DI534_07885 | Not Available | Positive | 1671755 - 1674118 | 81598.7 |
| acyltransferase | DI534_07890 | Not Available | Negative | 1674138 - 1674587 | 15603.7 |
| udp-glucose 4-epimerase | DI534_07895 | Not Available | Positive | 1674586 - 1675650 | 38923.3 |
| glutamine--scyllo-inositol aminotransferase | DI534_07900 | Not Available | Positive | 1675650 - 1676759 | 39602.4 |
| hypothetical protein | DI534_07905 | Not Available | Positive | 1676975 - 1678171 | 43848.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
