Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | DI534_07810 | Not Available | Positive | 1654218 - 1654967 | 26392.7 |
| hypothetical protein | DI534_07815 | Not Available | Positive | 1654964 - 1655305 | 12631.1 |
| hypothetical protein | DI534_07820 | Not Available | Positive | 1655298 - 1656938 | 57556.8 |
| glucosamine 6-phosphate synthetase | DI534_07825 | Not Available | Negative | 1656893 - 1658749 | 69787.8 |
| hypothetical protein | DI534_07830 | Not Available | Positive | 1658865 - 1660022 | 42704.4 |
| nucleotide sugar dehydrogenase | DI534_07835 | Not Available | Negative | 1660036 - 1661334 | 45951.6 |
| glycosyltransferase wbub | DI534_07840 | Not Available | Negative | 1661394 - 1662551 | 41730.0 |
| hypothetical protein | DI534_07845 | Not Available | Negative | 1662551 - 1663687 | 41191.3 |
| n-acetyl sugar amidotransferase | DI534_07850 | Not Available | Positive | 1663829 - 1664938 | 41739.6 |
| glycosyltransferase | DI534_07855 | Not Available | Positive | 1664869 - 1666077 | 44618.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
