Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-nucleoside phosphorylase | DI534_07660 | Not Available | Negative | 1622193 - 1623020 | 28688.4 |
| nad(p)h-quinone dehydrogenase | DI534_07665 | Not Available | Positive | 1623096 - 1624532 | 50007.1 |
| acetyl-/propionyl-coa carboxylase subunit alpha | DI534_07670 | Not Available | Negative | 1624564 - 1626321 | 61827.7 |
| septum formation inhibitor maf | DI534_07675 | Not Available | Negative | 1626477 - 1627103 | 21825.9 |
| 23s rrna methyltransferase | DI534_07680 | Not Available | Positive | 1627125 - 1628354 | 43578.7 |
| luxr family transcriptional regulator | DI534_07685 | Not Available | Positive | 1628471 - 1629166 | 24407.3 |
| histidine kinase | DI534_07690 | Not Available | Positive | 1629159 - 1630394 | 42952.2 |
| hypothetical protein | DI534_07695 | Not Available | Positive | 1630391 - 1631425 | 36659.4 |
| hypothetical protein | DI534_07700 | Not Available | Negative | 1631828 - 1632049 | 8146.69 |
| methylmalonyl-coa carboxyltransferase | DI534_07705 | Not Available | Negative | 1632046 - 1633644 | 57137.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
