Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease | DI534_07560 | Not Available | Negative | 1600939 - 1601982 | 36679.6 |
| succinate dehydrogenase iron-sulfur subunit | DI534_07565 | Not Available | Negative | 1602010 - 1602798 | 29323.1 |
| succinate dehydrogenase flavoprotein subunit | DI534_07570 | Not Available | Negative | 1602798 - 1604606 | 65999.3 |
| succinate dehydrogenase | DI534_07575 | Not Available | Negative | 1604629 - 1605081 | 16820.9 |
| succinate dehydrogenase, cytochrome b556 subunit | DI534_07580 | Not Available | Negative | 1605084 - 1605518 | 15947.0 |
| mannose-1-phosphate guanylyltransferase | DI534_07585 | Not Available | Positive | 1605658 - 1606773 | 39255.9 |
| bmp family abc transporter substrate-binding protein | DI534_07590 | Not Available | Positive | 1606969 - 1608075 | 37605.3 |
| heme abc transporter atp-binding protein | DI534_07595 | Not Available | Positive | 1608162 - 1609670 | 53822.2 |
| abc transporter permease | DI534_07600 | Not Available | Positive | 1609802 - 1610995 | 41517.6 |
| abc transporter permease | DI534_07605 | Not Available | Positive | 1611091 - 1612260 | 40833.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
