Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DI534_07510 | Not Available | Negative | 1591706 - 1593079 | 48762.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | DI534_07515 | Not Available | Negative | 1593167 - 1593643 | 16171.2 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DI534_07520 | Not Available | Negative | 1593640 - 1594917 | 46123.8 |
| riboflavin synthase | DI534_07525 | Not Available | Negative | 1594914 - 1595657 | 25466.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DI534_07530 | Not Available | Negative | 1595659 - 1596678 | 35279.0 |
| hypothetical protein | DI534_07535 | Not Available | Negative | 1596924 - 1597394 | 17692.1 |
| had family hydrolase | DI534_07540 | Not Available | Negative | 1597570 - 1598292 | 25749.5 |
| gnat family n-acetyltransferase | DI534_07545 | Not Available | Negative | 1598289 - 1598849 | 20853.7 |
| tryptophan--trna ligase | DI534_07550 | Not Available | Negative | 1598859 - 1599863 | 36368.4 |
| exodeoxyribonuclease iii | DI534_07555 | Not Available | Negative | 1600065 - 1600898 | 30692.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
