Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_07360 | Not Available | Positive | 1557435 - 1559543 | 75921.5 |
| aspartate-semialdehyde dehydrogenase | DI534_07365 | Not Available | Positive | 1559854 - 1560915 | 36684.0 |
| malate dehydrogenase (quinone) | DI534_07370 | Not Available | Positive | 1560963 - 1562432 | 52904.7 |
| radical sam protein | DI534_07375 | Not Available | Positive | 1562581 - 1563657 | 38928.9 |
| dna-binding response regulator | DI534_07380 | Not Available | Positive | 1563749 - 1564435 | 24917.0 |
| thymidine kinase | DI534_07385 | Not Available | Positive | 1564435 - 1565100 | 24750.5 |
| Trna-pro | Not Available | Not Available | Positive | 1565152 - 1565228 | Not Available |
| dipeptidyl aminopeptidase | DI534_07395 | Not Available | Positive | 1565310 - 1566521 | 43171.2 |
| metallophosphatase | DI534_07400 | Not Available | Negative | 1566535 - 1567494 | 34607.2 |
| penicillin-binding protein | DI534_07405 | Not Available | Negative | 1567491 - 1570061 | 89942.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
