Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination protein recr | DI534_07310 | Not Available | Positive | 1546325 - 1546921 | 21680.1 |
| aspartate kinase | DI534_07315 | Not Available | Positive | 1547000 - 1548265 | 44292.9 |
| hypothetical protein | DI534_07320 | Not Available | Negative | 1548297 - 1548563 | 9911.56 |
| hypothetical protein | DI534_07325 | Not Available | Negative | 1548577 - 1549890 | 47520.1 |
| virion core protein (lumpy skin disease virus) | DI534_07330 | Not Available | Negative | 1549907 - 1551082 | 41029.2 |
| glycoside hydrolase family 2 | DI534_07335 | Not Available | Negative | 1551231 - 1553072 | 68081.6 |
| laci family transcriptional regulator | DI534_07340 | Not Available | Negative | 1553095 - 1554132 | 37580.1 |
| abc transporter substrate-binding protein | DI534_07345 | Not Available | Positive | 1554294 - 1555613 | 47747.7 |
| sugar abc transporter permease | DI534_07350 | Not Available | Positive | 1555682 - 1556587 | 34055.1 |
| sugar abc transporter permease | DI534_07355 | Not Available | Positive | 1556590 - 1557438 | 31385.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
