Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family drug resistance efflux transporter | DI534_07250 | Not Available | Positive | 1535165 - 1536394 | 42639.3 |
| hypothetical protein | DI534_07255 | Not Available | Positive | 1536430 - 1537095 | 23898.9 |
| atp-binding protein | DI534_07260 | Not Available | Positive | 1537147 - 1538421 | 45687.1 |
| gnat family n-acetyltransferase | DI534_07265 | Not Available | Positive | 1538432 - 1539046 | 22871.1 |
| hypothetical protein | DI534_07270 | Not Available | Negative | 1539041 - 1539682 | 23560.4 |
| abc transporter | DI534_07275 | Not Available | Positive | 1539736 - 1540524 | 27235.8 |
| hypothetical protein | DI534_07280 | Not Available | Positive | 1540506 - 1542083 | 53318.9 |
| hypothetical protein | DI534_07285 | Not Available | Positive | 1542322 - 1543080 | 28550.5 |
| Trna-ser | Not Available | Not Available | Positive | 1543224 - 1543308 | Not Available |
| dna polymerase iii subunit gamma and tau | DI534_07305 | Not Available | Positive | 1544162 - 1546321 | 76766.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
