Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | DI534_07140 | Not Available | Negative | 1509444 - 1509809 | 13081.4 |
| sodium:proton antiporter | DI534_07145 | Not Available | Negative | 1509806 - 1510075 | 9204.77 |
| na+/h+ antiporter subunit e | DI534_07150 | Not Available | Negative | 1510072 - 1510620 | 20792.9 |
| na+/h+ antiporter subunit d | DI534_07155 | Not Available | Negative | 1510617 - 1512170 | 54702.5 |
| na(+)/h(+) antiporter subunit c | DI534_07160 | Not Available | Negative | 1512167 - 1512655 | 17331.8 |
| na+/h+ antiporter subunit a | DI534_07165 | Not Available | Negative | 1512652 - 1515591 | 103409.0 |
| xylulokinase | DI534_07170 | Not Available | Negative | 1515708 - 1517126 | 48265.9 |
| xylose isomerase | DI534_07175 | Not Available | Negative | 1517217 - 1518410 | 43565.2 |
| laci family transcriptional regulator | DI534_07180 | Not Available | Positive | 1518565 - 1519584 | 36466.8 |
| glycosyl hydrolase | DI534_07190 | Not Available | Negative | 1520360 - 1522705 | 81673.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
