Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_07040 | Not Available | Positive | 1489553 - 1490224 | 24476.5 |
| recombinase | DI534_07045 | Not Available | Negative | 1490221 - 1490787 | 21501.6 |
| dna-binding response regulator | DI534_07050 | Not Available | Positive | 1491076 - 1491816 | 27251.0 |
| two-component sensor histidine kinase | DI534_07055 | Not Available | Positive | 1491813 - 1493273 | 51538.8 |
| hypothetical protein | DI534_07060 | Not Available | Positive | 1493279 - 1494529 | 42421.5 |
| 50s ribosomal protein l10 | DI534_07065 | Not Available | Positive | 1494744 - 1495259 | 17940.6 |
| 50s ribosomal protein l7/l12 | DI534_07070 | Not Available | Positive | 1495341 - 1495733 | 13373.8 |
| sugar abc transporter substrate-binding protein | DI534_07075 | Not Available | Positive | 1496058 - 1497413 | 48068.8 |
| abc transporter permease | DI534_07080 | Not Available | Positive | 1497503 - 1498471 | 35470.3 |
| sugar abc transporter permease | DI534_07085 | Not Available | Positive | 1498468 - 1499469 | 36626.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
