Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | DI534_06940 | Not Available | Negative | 1471432 - 1472307 | 31607.7 |
| hypothetical protein | DI534_06945 | Not Available | Negative | 1472481 - 1473335 | 31327.0 |
| hypothetical protein | DI534_06950 | Not Available | Negative | 1473647 - 1473961 | 10782.3 |
| hypothetical protein | DI534_06955 | Not Available | Negative | 1473961 - 1475982 | 69848.9 |
| atp-binding protein | DI534_06960 | Not Available | Positive | 1475942 - 1477027 | 37696.0 |
| dna-binding response regulator | DI534_06965 | Not Available | Positive | 1477024 - 1477677 | 22762.2 |
| amino acid transporter | DI534_06970 | Not Available | Negative | 1477806 - 1478480 | 23218.1 |
| argp/lysg family dna-binding transcriptional regulator | DI534_06975 | Not Available | Positive | 1478553 - 1479449 | 31858.1 |
| Trna-trp | Not Available | Not Available | Positive | 1479585 - 1479660 | Not Available |
| preprotein translocase subunit sece | DI534_06985 | Not Available | Positive | 1479710 - 1479991 | 10557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
