Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_06840 | Not Available | Negative | 1450956 - 1452743 | 64313.9 |
| hypothetical protein | DI534_06845 | Not Available | Positive | 1452760 - 1453740 | 32807.2 |
| hypothetical protein | DI534_06850 | Not Available | Negative | 1453766 - 1454425 | 24062.0 |
| hypothetical protein | DI534_06855 | Not Available | Negative | 1454458 - 1454982 | 18416.0 |
| aspartate aminotransferase | DI534_06860 | Not Available | Positive | 1455136 - 1456203 | 37681.0 |
| hypothetical protein | DI534_06865 | Not Available | Negative | 1456190 - 1458670 | 85929.1 |
| hypothetical protein | DI534_06870 | Not Available | Positive | 1458819 - 1459856 | 36786.6 |
| hypothetical protein | DI534_06875 | Not Available | Positive | 1459859 - 1461076 | 41185.9 |
| hypothetical protein | DI534_06880 | Not Available | Positive | 1461013 - 1462149 | 39241.4 |
| hypothetical protein | DI534_06885 | Not Available | Positive | 1462212 - 1462685 | 15970.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
