Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal transporter | DI534_06690 | Not Available | Positive | 1413946 - 1414155 | 7205.46 |
| heavy metal-binding domain-containing protein | DI534_06695 | Not Available | Positive | 1414155 - 1415099 | 32600.6 |
| cadmium-translocating p-type atpase | DI534_06700 | Not Available | Positive | 1415126 - 1417402 | 78551.2 |
| hypothetical protein | DI534_06705 | Not Available | Positive | 1417458 - 1417718 | 8742.07 |
| ferredoxin reductase | DI534_06710 | Not Available | Positive | 1417821 - 1419017 | 39887.6 |
| heavy metal translocating p-type atpase | DI534_06715 | Not Available | Positive | 1419223 - 1421307 | 72294.9 |
| hypothetical protein | DI534_06720 | Not Available | Positive | 1421317 - 1421631 | 11592.8 |
| transcriptional regulator | DI534_06725 | Not Available | Positive | 1421682 - 1422032 | 12805.2 |
| mfs transporter | DI534_06730 | Not Available | Positive | 1422029 - 1423240 | 41873.3 |
| arsr family transcriptional regulator | DI534_06735 | Not Available | Positive | 1423274 - 1423669 | 14248.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
