Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_06635 | Not Available | Negative | 1405722 - 1406609 | 30933.2 |
| hypothetical protein | DI534_06645 | Not Available | Positive | 1407711 - 1408025 | 10861.8 |
| hypothetical protein | DI534_06650 | Not Available | Negative | 1408199 - 1409824 | 56588.8 |
| hypothetical protein | DI534_06655 | Not Available | Negative | 1409835 - 1410269 | 15645.6 |
| sigma-70 family rna polymerase sigma factor | DI534_06660 | Not Available | Negative | 1410290 - 1410898 | 22589.7 |
| yajq family cyclic di-gmp-binding protein | DI534_06665 | Not Available | Negative | 1411056 - 1411544 | 18067.6 |
| murein transglycosylase | DI534_06670 | Not Available | Positive | 1411567 - 1412361 | 26557.3 |
| Trna-tyr | Not Available | Not Available | Positive | 1412488 - 1412572 | Not Available |
| disulfide bond formation protein dsba | DI534_06680 | Not Available | Negative | 1412646 - 1413320 | 24024.3 |
| hypothetical protein | DI534_06685 | Not Available | Negative | 1413402 - 1413821 | 13961.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
