Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate--nucleotide phosphotransferase | DI534_06585 | Not Available | Positive | 1394326 - 1395171 | 31331.9 |
| hypothetical protein | DI534_06590 | Not Available | Negative | 1395232 - 1395951 | 25064.2 |
| dna-binding response regulator | DI534_06595 | Not Available | Negative | 1396064 - 1396717 | 23370.0 |
| hypothetical protein | DI534_06600 | Not Available | Negative | 1396714 - 1398825 | 75534.3 |
| isochorismate synthase | DI534_06605 | Not Available | Negative | 1398886 - 1400028 | 40049.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | DI534_06610 | Not Available | Positive | 1400264 - 1400998 | 26553.0 |
| geranylgeranyl pyrophosphate synthase | DI534_06615 | Not Available | Positive | 1401018 - 1402079 | 36914.9 |
| pyridine nucleotide-disulfide oxidoreductase | DI534_06620 | Not Available | Positive | 1402136 - 1403488 | 49726.2 |
| hypothetical protein | DI534_06625 | Not Available | Negative | 1403497 - 1403913 | 14906.1 |
| cardiolipin synthase | DI534_06630 | Not Available | Negative | 1404043 - 1405512 | 55979.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
