Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantetheine-phosphate adenylyltransferase | DI534_06485 | Not Available | Positive | 1370158 - 1370643 | 17240.0 |
| hypothetical protein | DI534_06490 | Not Available | Negative | 1370661 - 1372274 | 52152.1 |
| hypothetical protein | DI534_06495 | Not Available | Positive | 1372379 - 1372729 | 12820.5 |
| glucose-6-phosphate dehydrogenase (coenzyme-f420) | DI534_06500 | Not Available | Positive | 1372806 - 1373816 | 37427.3 |
| imp dehydrogenase | DI534_06505 | Not Available | Positive | 1373954 - 1375003 | 37007.3 |
| llm class f420-dependent oxidoreductase | DI534_06510 | Not Available | Positive | 1375039 - 1376010 | 36055.1 |
| coenzyme f420-0:l-glutamate ligase | DI534_06515 | Not Available | Positive | 1376101 - 1376874 | 26262.4 |
| atpase | DI534_06520 | Not Available | Positive | 1377034 - 1378062 | 36766.1 |
| hypothetical protein | DI534_06525 | Not Available | Positive | 1378086 - 1379366 | 46589.7 |
| transglutaminase domain-containing protein | DI534_06530 | Not Available | Positive | 1379125 - 1381590 | 87231.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
