Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_06385 | Not Available | Positive | 1346514 - 1348907 | 84098.7 |
| phosphopeptide-binding protein | DI534_06390 | Not Available | Positive | 1348904 - 1353412 | 158543.0 |
| wxg100 family type vii secretion target | DI534_06395 | Not Available | Positive | 1353531 - 1353827 | 10463.0 |
| hypothetical protein | DI534_06400 | Not Available | Positive | 1353913 - 1354245 | 12247.2 |
| hypothetical protein | DI534_06405 | Not Available | Positive | 1354248 - 1355603 | 47690.5 |
| hypothetical protein | DI534_06410 | Not Available | Positive | 1355648 - 1356133 | 17696.3 |
| hypothetical protein | DI534_06415 | Not Available | Positive | 1356114 - 1356722 | 21954.0 |
| hypothetical protein | DI534_06420 | Not Available | Positive | 1356719 - 1357357 | 23787.0 |
| hypothetical protein | DI534_06425 | Not Available | Positive | 1357518 - 1358207 | 23958.9 |
| 3-isopropylmalate dehydratase large subunit | DI534_06430 | Not Available | Positive | 1358388 - 1359845 | 51927.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
