Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | DI534_06335 | Not Available | Positive | 1330638 - 1332089 | 49797.1 |
| tellurium resistance protein terc | DI534_06340 | Not Available | Positive | 1332389 - 1333390 | 37115.4 |
| hypothetical protein | DI534_06345 | Not Available | Positive | 1333422 - 1333961 | 19012.6 |
| serine/threonine-protein phosphatase | DI534_06350 | Not Available | Positive | 1333966 - 1334898 | 33400.2 |
| hypothetical protein | DI534_06355 | Not Available | Positive | 1334895 - 1336055 | 39327.5 |
| serine/threonine protein kinase | DI534_06360 | Not Available | Positive | 1336055 - 1337728 | 58516.5 |
| hypothetical protein | DI534_06365 | Not Available | Positive | 1337736 - 1338476 | 26287.1 |
| hypothetical protein | DI534_06370 | Not Available | Positive | 1338579 - 1344230 | 196996.0 |
| atpase | DI534_06375 | Not Available | Positive | 1344257 - 1345225 | 34493.5 |
| duf58 domain-containing protein | DI534_06380 | Not Available | Positive | 1345231 - 1346517 | 46383.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
