Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | DI534_06285 | Not Available | Positive | 1322667 - 1324217 | 53518.2 |
| nad-dependent epimerase | DI534_06290 | Not Available | Positive | 1324214 - 1325122 | 32331.7 |
| hypothetical protein | DI534_06295 | Not Available | Negative | 1325135 - 1325716 | 21969.3 |
| cytochrome p450 | DI534_06300 | Not Available | Negative | 1325822 - 1326937 | 40554.9 |
| hypothetical protein | DI534_06305 | Not Available | Negative | 1327070 - 1327537 | 16852.2 |
| marr family transcriptional regulator | DI534_06310 | Not Available | Negative | 1327681 - 1328172 | 18107.5 |
| nucleoside hydrolase | DI534_06315 | Not Available | Positive | 1328211 - 1329167 | 33381.9 |
| Trna-gln | Not Available | Not Available | Positive | 1329220 - 1329291 | Not Available |
| hypothetical protein | DI534_06325 | Not Available | Negative | 1329315 - 1329965 | 23601.5 |
| hypothetical protein | DI534_06330 | Not Available | Negative | 1330042 - 1330503 | 15706.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
