Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr family transcriptional regulator | DI534_06235 | Not Available | Negative | 1313380 - 1314159 | 27942.0 |
| spermidine/putrescine abc transporter atp-binding protein | DI534_06240 | Not Available | Positive | 1314285 - 1315316 | 37537.8 |
| spermidine/putrescine abc transporter substrate-binding protein | DI534_06245 | Not Available | Positive | 1315359 - 1316540 | 41986.6 |
| spermidine/putrescine abc transporter permease | DI534_06250 | Not Available | Positive | 1316573 - 1317469 | 32176.3 |
| spermidine/putrescine abc transporter permease | DI534_06255 | Not Available | Positive | 1317479 - 1318279 | 28349.3 |
| hypothetical protein | DI534_06260 | Not Available | Negative | 1318284 - 1318781 | 17674.1 |
| 3-oxoacyl-acp reductase | DI534_06265 | Not Available | Positive | 1318845 - 1319591 | 25317.2 |
| 3-oxoacyl-acp synthase | DI534_06270 | Not Available | Positive | 1319631 - 1320740 | 39475.6 |
| glycosyl transferase | DI534_06275 | Not Available | Positive | 1320737 - 1321507 | 27731.2 |
| cytochrome p450 | DI534_06280 | Not Available | Positive | 1321504 - 1322658 | 40314.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
