Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribonuclease | DI534_06135 | Not Available | Positive | 1290277 - 1291200 | 33492.5 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | DI534_06140 | Not Available | Positive | 1291197 - 1292045 | 29414.6 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DI534_06145 | Not Available | Positive | 1292078 - 1293010 | 32026.1 |
| hypothetical protein | DI534_06150 | Not Available | Positive | 1293210 - 1293671 | 16778.1 |
| phosphate abc transporter permease subunit pstc | DI534_06155 | Not Available | Positive | 1293701 - 1294690 | 34171.3 |
| phosphate abc transporter permease ptsa | DI534_06160 | Not Available | Positive | 1294687 - 1295937 | 44385.9 |
| phosphate abc transporter substrate-binding protein psts | DI534_06165 | Not Available | Positive | 1296009 - 1297499 | 51226.1 |
| hypothetical protein | DI534_06170 | Not Available | Positive | 1297607 - 1300132 | 86400.1 |
| hypothetical protein | DI534_06175 | Not Available | Positive | 1300188 - 1301345 | 38745.2 |
| hypothetical protein | DI534_06180 | Not Available | Positive | 1301375 - 1302979 | 53872.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
