Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DI534_06085 | Not Available | Negative | 1278056 - 1278391 | 11791.6 |
| thioredoxin domain-containing protein | DI534_06090 | Not Available | Positive | 1278576 - 1280417 | 63945.2 |
| sulfurtransferase | DI534_06095 | Not Available | Negative | 1280440 - 1281321 | 30735.4 |
| coa-binding protein | DI534_06100 | Not Available | Negative | 1281621 - 1282211 | 21439.5 |
| bifunctional o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DI534_06105 | Not Available | Negative | 1282216 - 1283577 | 47953.1 |
| d-alanine--d-alanine ligase | DI534_06110 | Not Available | Negative | 1283599 - 1284663 | 36385.7 |
| alanine racemase | DI534_06115 | Not Available | Negative | 1284660 - 1285757 | 38323.9 |
| phospholipid carrier-dependent glycosyltransferase | DI534_06120 | Not Available | Negative | 1285832 - 1287520 | 62386.1 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DI534_06125 | Not Available | Positive | 1287723 - 1288529 | 28143.7 |
| methionine--trna ligase | DI534_06130 | Not Available | Positive | 1288685 - 1290280 | 58777.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
