Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DI534_00560 | Not Available | Positive | 121538 - 122794 | 42221.9 |
| merr family transcriptional regulator | DI534_00565 | Not Available | Positive | 122760 - 123536 | 28374.9 |
| hypothetical protein | DI534_00570 | Not Available | Negative | 123577 - 124140 | 18176.1 |
| hypothetical protein | DI534_00575 | Not Available | Positive | 124279 - 124656 | 13238.6 |
| Trna-val | Not Available | Not Available | Positive | 124712 - 124787 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 124925 - 124996 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 125036 - 125106 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 125139 - 125210 | Not Available |
| threonine--trna ligase | DI534_00600 | Not Available | Positive | 125343 - 127298 | 73275.8 |
| serine protease | DI534_00605 | Not Available | Positive | 127463 - 130870 | 113547.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
