Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase | DI534_05885 | Not Available | Positive | 1238806 - 1239669 | 30315.3 |
| sugar abc transporter substrate-binding protein | DI534_05890 | Not Available | Positive | 1239744 - 1240904 | 40371.9 |
| dehydrogenase | DI534_05895 | Not Available | Positive | 1240962 - 1242143 | 42765.3 |
| sugar abc transporter atp-binding protein | DI534_05900 | Not Available | Positive | 1242172 - 1243656 | 53336.6 |
| abc transporter permease | DI534_05905 | Not Available | Positive | 1243653 - 1244621 | 33265.6 |
| oxidoreductase | DI534_05910 | Not Available | Positive | 1244669 - 1245736 | 38536.1 |
| ap endonuclease | DI534_05915 | Not Available | Positive | 1245754 - 1246746 | 36651.8 |
| hypothetical protein | DI534_05920 | Not Available | Positive | 1246839 - 1247516 | 22681.1 |
| xre family transcriptional regulator | DI534_05925 | Not Available | Negative | 1247582 - 1249015 | 52859.6 |
| phosphoenolpyruvate carboxykinase (gtp) | DI534_05930 | Not Available | Positive | 1249122 - 1250954 | 66520.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
