Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-erythrulose kinase | DI534_05785 | Not Available | Positive | 1209350 - 1211089 | 58237.8 |
| ribose-5-phosphate isomerase | DI534_05790 | Not Available | Positive | 1211086 - 1211562 | 16422.6 |
| triose-phosphate isomerase | DI534_05795 | Not Available | Positive | 1211562 - 1212317 | 25971.1 |
| sugar phosphate isomerase | DI534_05800 | Not Available | Positive | 1212314 - 1213129 | 29342.1 |
| oxidoreductase | DI534_05805 | Not Available | Positive | 1213135 - 1214022 | 31382.8 |
| beta-glucosidase | DI534_05810 | Not Available | Negative | 1214059 - 1215810 | 63200.9 |
| alpha-l-rhamnosidase | DI534_05815 | Not Available | Negative | 1215807 - 1218452 | 96215.9 |
| laci family transcriptional regulator | DI534_05820 | Not Available | Negative | 1218497 - 1219486 | 35340.2 |
| mfs transporter | DI534_05825 | Not Available | Positive | 1219586 - 1220860 | 43852.0 |
| glycosyl hydrolase | DI534_05830 | Not Available | Positive | 1220857 - 1223280 | 87329.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
