Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DI534_05680 | Not Available | Negative | 1188683 - 1189396 | 26696.7 |
| glyoxalase | DI534_05685 | Not Available | Negative | 1189393 - 1189920 | 19604.1 |
| mfs transporter | DI534_05690 | Not Available | Positive | 1190053 - 1192239 | 77673.5 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | DI534_05695 | Not Available | Positive | 1192239 - 1193459 | 41749.3 |
| nitroreductase family deazaflavin-dependent oxidoreductase | DI534_05700 | Not Available | Positive | 1193511 - 1193918 | 14630.2 |
| transcriptional regulator | DI534_05705 | Not Available | Positive | 1193915 - 1194355 | 15206.0 |
| duf3817 domain-containing protein | DI534_05710 | Not Available | Positive | 1194379 - 1194840 | 16546.6 |
| hypothetical protein | DI534_05715 | Not Available | Positive | 1194919 - 1196337 | 50823.5 |
| hypothetical protein | DI534_05720 | Not Available | Negative | 1196675 - 1197136 | 16762.9 |
| hypothetical protein | DI534_05725 | Not Available | Positive | 1197235 - 1198869 | 54925.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
