Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Leifsonia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Leifsonia |
| Species | Leifsonia xyli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | xylem |
| Biotic relationship | Free living |
| Host(s) | Oryza sativa, Zea mays subsp. mays, Cynodon dactylon |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
539259 bp
Thymine Count
542967 bp
Guanine Count
1228610 bp
Cytosine Count
1218057 bp
Genome Length
3528893 bp
Protein-coding Genes
3206 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | DI534_05630 | Not Available | Negative | 1177419 - 1178849 | 51732.7 |
| cupin domain-containing protein | DI534_05635 | Not Available | Positive | 1179038 - 1179934 | 32121.5 |
| short-chain dehydrogenase | DI534_05640 | Not Available | Positive | 1179931 - 1180635 | 24273.1 |
| hypothetical protein | DI534_05645 | Not Available | Negative | 1180632 - 1181771 | 37405.6 |
| abc transporter permease | DI534_05650 | Not Available | Negative | 1181818 - 1182819 | 34662.6 |
| abc transporter | DI534_05655 | Not Available | Negative | 1182816 - 1184342 | 53184.1 |
| hypothetical protein | DI534_05660 | Not Available | Negative | 1184346 - 1185386 | 36001.5 |
| xre family transcriptional regulator | DI534_05665 | Not Available | Negative | 1185566 - 1186258 | 24472.0 |
| aminopeptidase | DI534_05670 | Not Available | Positive | 1186398 - 1187780 | 51128.4 |
| nad(p)-dependent oxidoreductase | DI534_05675 | Not Available | Negative | 1187817 - 1188680 | 29706.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ratoon stunting disease | Causes | PMC2516522 |
| Ratoon-stunting disease | Causes | PMC2516522 |
